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Swammerdam Institute for Life Sciences Swammerdam Institute for Life Sciences

Prof. P.J. (Pernette) Verschure

Faculty of Science
SILS/Molecular Plant Pathology
Photographer: Pernette Verschure
Visiting address
  • Science Park 904
  • Room number: C2.106
Postal address
  • Postbus 1212
    1000 BE Amsterdam
Contact details
Social media
  • Publications

    2024

    • Koncz, M., Lermo Jimenez, M. A., Piebes, D. G. E., Postma, M., & Verschure, P. J. (2024). Single-Molecule Analysis of Transcription Dynamics to Understand the Relationship Between Epigenetic Alterations and Transcriptional Variability. In A. Jeltsch, & M. G. Rots (Eds.), Epigenome Editing: Methods and Protocols (2nd ed., pp. 449-460). (Methods in molecular biology; Vol. 2842). Humana Press. https://doi.org/10.1007/978-1-0716-4051-7_23 [details]
    • Sarno, F., Koncz, M., Eilers, R. E., Verschure, P. J., & Rots, M. G. (2024). Generation of Cell Lines Stably Expressing a dCas9-Fusion or sgRNA to Address Dynamics of Long-Term Effects of Epigenetic Editing. In A. Jeltsch, & M. G. Rots (Eds.), Epigenome Editing: Methods and Protocols (2nd ed., pp. 289-307). (Methods in molecular biology; Vol. 2842). Humana Press. https://doi.org/10.1007/978-1-0716-4051-7_15 [details]
    • van den Berg van Saparoea, A. C. H., van Loosen, Q. C., Sarno, F., Ntini, E., Rots, M. G., Gjaltema, R. A. F., & Verschure, P. J. (2024). Plasmid Delivery and Single-Cell Plasmid Expression Analysis for CRISPR/dCas9-Based Epigenetic Editing. In A. Jeltsch, & M. G. Rots (Eds.), Epigenome Editing: Methods and Protocols (2nd ed., pp. 255-265). (Methods in molecular biology; Vol. 2842). Humana Press. https://doi.org/10.1007/978-1-0716-4051-7_13 [details]

    2023

    2020

    • Borgoni, S., Sofyali, E., Soleimani, M., Wilhelm, H., Müller-Decker, K., Will, R., Noronha, A., Beumers, L., Verschure, P. J., Yarden, Y., Magnani, L., van Kampen, A. H. C., Moerland, P. D., & Wiemann, S. (2020). Time-Resolved Profiling Reveals ATF3 as a Novel Mediator of Endocrine Resistance in Breast Cancer. Cancers, 12(10), Article 2918. https://doi.org/10.3390/cancers12102918 [details]
    • Gjaltema, R. A. F., Goubert, D., Huisman, C., Del Pilar García Tobilla, C., Koncz, M., Jellema, P. G., Wu, D., Brouwer, U., Kiss, A., Verschure, P. J., Bank, R. A., & Rots, M. G. (2020). KRAB-Induced Heterochromatin Effectively Silences PLOD2 Gene Expression in Somatic Cells and is Resilient to TGFβ1 Activation. International Journal of Molecular Sciences, 21(10), Article 3634. https://doi.org/10.3390/ijms21103634 [details]
    • Mandemaker, I. K., Zhou, D., Bruens, S. T., Dekkers, D. H., Verschure, P. J., Edupuganti, R. R., Meshorer, E., Demmers, J. A. A., & Marteijn, J. A. (2020). Histone H1 eviction by the histone chaperone SET reduces cell survival following DNA damage. Journal of Cell Science, 133, Article jcs235473. Advance online publication. https://doi.org/10.1242/jcs.235473 [details]
    • Soleimani Dodaran, M., Borgoni, S., Sofyali, E., Verschure, P. J., Wiemann, S., Moerland, P. D., & van Kampen, A. H. C. (2020). Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2-breast cancer. BMC Cancer, 20, Article 676. https://doi.org/10.1186/s12885-020-07100-z [details]
      • Related datasets
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 8 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673833.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 7 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673830.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 4 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673821.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 3 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673818.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 14 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673806.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 2 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673815.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 10 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673794.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 13 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673803.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 1 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673812.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 3 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673818.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 14 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673806.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 2 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673815.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 10 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673794.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 8 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673833.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 13 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673803.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 1 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673812.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 4 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673821.v1
        • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 7 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673830.v1
        • Soleimani Dodaran, M., Borgoni, S., Sofyall, E., Verschure, P. J., Wiemann, S., Moerland, P. D. & Van Kampen, A. H. C. (2020). Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Springer Nature. https://doi.org/10.6084/m9.figshare.c.5067306.v1

    2018

    • Beckman, W., Vuist, I. M., Kempe, H., & Verschure, P. J. (2018). Cell-to-Cell Transcription Variability as Measured by Single-Molecule RNA FISH to Detect Epigenetic State Switching. In A. Jeltsch, & M. G. Rots (Eds.), Epigenome Editing: Methods and Protocols (pp. 385-393). (Methods in Molecular Biology). Humana Press. https://doi.org/10.1007/978-1-4939-7774-1_21 [details]
    • Naue, J., Hoefsloot, H. C. J., Kloosterman, A. D., & Verschure, P. J. (2018). Forensic DNA methylation profiling from minimal traces: How low can we go? Forensic Science International. Genetics, 33, 17-23. https://doi.org/10.1016/j.fsigen.2017.11.004 [details]
    • Naue, J., Sänger, T., Hoefsloot, H. C. J., Lutz-Bonengel, S., Kloosterman, A. D., & Verschure, P. J. (2018). Proof of concept study of age-dependent DNA methylation markers across different tissues by massive parallel sequencing. Forensic Science International. Genetics, 36, 152-159. https://doi.org/10.1016/j.fsigen.2018.07.007 [details]

    2017

    2016

    2015

    2014

    2013

    • Brink, M. C., Piebes, D. G. E., de Groote, M. L., Luijsterburg, M. S., Casas-Delucchi, C. S., van Driel, R., Rots, M. G., Cardoso, M. C., & Verschure, P. J. (2013). A role for MeCP2 in switching gene activity via chromatin unfolding and HP1γ displacement. PLoS ONE, 8(7), e69347. https://doi.org/10.1371/journal.pone.0069347 [details]
    • Muraro, M. J., Kempe, H., & Verschure, P. J. (2013). Concise Review: The Dynamics of Induced Pluripotency and Its Behavior Captured in Gene Network Motifs. Stem Cells, 31(5), 838-848. Advance online publication. https://doi.org/10.1002/stem.1340 [details]

    2012

    • de Groote, M. L., Verschure, P. J., & Rots, M. G. (2012). Epigenetic Editing: targeted rewriting of epigenetic marks to modulate expression of selected target genes. Nucleic Acids Research, 40(21), 10596-10613. https://doi.org/10.1093/nar/gks863 [details]

    2011

    • Schwabe, A., Dobrzynski, M., Rybakova, E., Verschure, P. J., & Bruggeman, F. J. (2011). Origins of stochastic intracellular processes and consequences for cell-to-cell variability and cellular survival strategies. Methods in Enzymology, 500, 597-625. https://doi.org/10.1016/B978-0-12-385118-5.00028-1 [details]

    2010

    • Scassellati, C., Albi, E., Cmarko, D., Tiberi, C., Cmarkova, J., Bouchet‑Marquis, C., Verschure, P. J., van Driel, R., Viola Magni, M., & Fakan, S. (2010). Intranuclear sphingomyelin is associated with transcriptionally active chromatin and plays a role in nuclear integrity. Biology of the Cell, 102(6), 361-375. https://doi.org/10.1042/BC20090139 [details]

    2009

    • Luijsterburg, M. S., Dinant, C., Lans, H., Stap, J., Wiernasz, E. S., Lagerwerf, S., Warmerdam, D. O., Lindh, M., Brink, M. C., Dobrucki, J. W., Aten, J. A., Fousteri, M. I., Jansen, G., Dantuma, N. P., Vermeulen, W., Mullenders, L. H. F., Houtsmuller, A. B., Verschure, P. J., & van Driel, R. (2009). Heterochromatin protein 1 is recruited to various types of DNA damage. Journal of Cell Biology, 185(4), 577-586. https://doi.org/10.1083/jcb.200810035 [details]
    • Mateos-Langerak, J., Bohn, M., de Leeuw, W., Giromus, O., Manders, E. M. M., Verschure, P. J., Indemans, M. H. G., Gierman, H. J., Heermann, D. W., van Driel, R., & Goetze, S. (2009). Spatially confined folding of chromatin in the interphase nucleus. Proceedings of the National Academy of Sciences of the United States of America, 106(10), 3812-3817. https://doi.org/10.1073/pnas.0809501106 [details]

    2007

    • Mateos Langerak, J., Brink, M. C., Luijsterburg, M. S., van der Kraan, I., van Driel, R., & Verschure, P. J. (2007). Pericentromeric heterochromatin domains are maintained without accumulation of HP1. Molecular Biology of the Cell, 18(4), 1464-1471. https://doi.org/10.1091/mbc.E06-01-0025 [details]
    • van Royen, M. E., Cunha, S. M., Brink, M. C., Mattern, K. A., Nigg, A. L., Dubbink, H. J., Verschure, P. J., Trapman, J., & Houtsmuller, A. B. (2007). Compartmentalization of androgen receptor protein-protein interactions in living cells. Journal of Cell Biology, 177(1), 63-72. https://doi.org/10.1083/jcb.200609178 [details]

    2006

    • Brink, M. C., van der Velden, Y., de Leeuw, W., Mateos Langerak, J., Belmont, A. S., van Driel, R., & Verschure, P. J. (2006). Truncated HP1 lacking a functional chromodomain induces heterochromatinization upon in vivo targeting. Histochemistry and Cell Biology, 125, 53-61. https://doi.org/10.1007/s00418-005-0088-7 [details]
    • Verschure, P. J. (2006). Chromosome organization and gene control: It is difficult to see the picture when you are inside the frame. Journal of Cellular Biochemistry, 99(1), 23-34. [details]
    • Verschure, P. J., Visser, A. E., & Rots, M. G. (2006). Step out of the groove: epigenetic gene control systems and engineered transcription factors. Advances in Genetics Incorporating Molecular Genetic Medicine, 56, 163-204. https://doi.org/10.1016/S0065-2660(06)56005-5 [details]
    • Visser, A. E., Verschure, P. J., Gommans, W. M., Haisma, H. J., & Rots, M. G. (2006). Step into the groove: engineered transcription factors as modulators of gene expression. Advances in Genetics Incorporating Molecular Genetic Medicine, 56, 131-161. https://doi.org/10.1016/S0065-2660(06)56004-3 [details]
    • de Leeuw, W., Verschure, P. J., & van Liere, R. (2006). Visualization and analysis of large data collections: a case study applied to confocal microscopy data. IEEE Transactions on visualization and computer graphics, 12 (5). [details]

    2005

    • Cremazy, F. G. E., Manders, E. M. M., Bastiaens, P. I. H., Kramer, G., Hager, G. L., van Munster, E. B., Verschure, P. J., Gadella, T. W. J., & van Driel, R. (2005). Imaging in situ protein-DNA interactions in the cell nucleus using FRET-FLIM. Experimental Cell Research, 309, 390-396. https://doi.org/10.1016/j.yexcr.2005.06.007 [details]
    • Verschure, P. J., van der Kraan, K., de Leeuw, W., van der Vlag, J., Carpenter, A. E., Belmont, A. S., & van Driel, R. (2005). In vivo HP1 targeting causes large-scale chromatin condensation and enhanced histone lysine methylation. Molecular and Cellular Biology, 25, 4552-4564. https://doi.org/10.1128/MCB.25.11.4552-4564.2005 [details]
    • Visser, A. E., van Driel, R., & Verschure, P. J. (2005). Functional organization of chromosomes in the interphase cell nucleus. In P. Hemmerich, & S. Diekmann (Eds.), Visions of the cell nucleus. (pp. 19-36). Los Angeles, CA. USA: American Scientific Publ.. [details]

    2004

    2003

    • Cmarko, D., Verschure, P. J., Otte, A. P., van Driel, R., & Fakan, S. (2003). Polycomb group gene silencing proteins are concentrated in the perichromatin compartment of the mammalian nucleus. Journal of Cell Science, 116, 335-343. https://doi.org/10.1242/jcs.00225 [details]
    • Verschure, P. J., van der Kraan, K., Manders, E. M. M., Hoogstraten, D., Houtsmuller, A. B., & van Driel, R. (2003). Condensed chromatin domains in the mammalian nucleus are accessible to large macromolecules. EMBO Reports, 4, 861-866. https://doi.org/10.1038/sj.embor.embor922 [details]
    • van Driel, R., Fransz, P. F., & Verschure, P. J. (2003). The eukaryotic genome: a system regulated at different hierarchical levels. Journal of Cell Science, 116, 4067-4075. https://doi.org/10.1242/jcs.00779 [details]

    2002

    • Verschure, P. J., van der Kraan, I., Enserink, J. M., Moné, M. J., Manders, E. M. M., & van Driel, R. (2002). Large-scale chromatin organization and the localization of proteins involved in gene expression in human cells. The Journal of Histochemistry and Cytochemistry, 50, 1303-1312. https://doi.org/10.1177/002215540205001003 [details]

    2001

    • Moné, M. J., Volker, M., Nikaido, O., Mullenders, L. H. F., van Zeeland, A. A., Verschure, P. J., Manders, E. M. M., & van Driel, R. (2001). Local UV induced DNA damage in cell nuclei results in local transcription inhibition. EMBO Reports, 2, 1013-1017. https://doi.org/10.1093/embo-reports/kve224 [details]

    2000

    • Cmarko, D., Verschure, P. J., Rothblum, L. I., Hernandez-Verdun, D., van Driel, R., Amalric, F., & Fakan, S. (2000). Ultrastructural analysis of nucleolar transcription in the cells microinjected with 5-bromo-UTP. Histochemistry and Cell Biology, 113, 181-187. [details]

    1999

    • Cmarko, D., Verschure, P. J., Martin, T. E., Dahmus, M. E., Krause, S., Fu, X-D., van Driel, R., & Fakan, S. (1999). Ultrastructural analysis of transciption and splicing in the cell nucleus after BrUTP-microinjection. Molecular Biology of the Cell, 10, 211-223. https://doi.org/10.1091/mbc.10.1.211 [details]

    1997

    2002

    • Sanchez-Montanes, M. A., Konig, P., & Verschure, P. J. (2002). Learning sensory maps with real-world stimuli in real time using a biophysically realistic learning rule. IEEE Transactions on Neural Networks, 13(3), 619-32. https://doi.org/10.1109/TNN.2002.1000128

    2015

    2004

    • Verschure, P. J. (2004). Genetisch ongelijk. Natuurwetenschap en Techniek, 27e jrg, 20-27. [details]

    2010

    • Verschure, P. J. (2010). Epigenetic gene regulation of the eukaryotic genome: Sytems Biology approaches using synthetic cell systems. Poster session presented at The EMBO meeting Barcelona 2010, .

    Prize / grant

    • Verschure, P. J. (2010). Epigenetic gene regulation of the eukaryotic genome: Sytems Biology approaches using synthetic cell systems.
    • Verschure, P. J. (2006). Functional chromosome organization in the interphase nucleus:Epigenetic gene control..

    Membership / relevant position

    Media appearance

    • Verschure, P. J. (01-01-2013). de toekomst van Synthetic Biology [Print] Amsterdam, the Netherlands. de toekomst van Synthetic Biology.
    • Verschure, P. J. (20-09-2011). The impact of synthetic biology on Science and Society [Print] Science Center Nemo, Amsterdam. The impact of synthetic biology on Science and Society.
    • Verschure, P. J. (08-03-2011). Member of Expert Panel 'scholierendebat' [Print] Science Center Nemo, Amsterdam. Member of Expert Panel 'scholierendebat'.
    • Verschure, P. J. (13-01-2011). Evaluation committee Portuguese Foundation for Science and Technology [Print]. Evaluation committee Portuguese Foundation for Science and Technology.
    • Verschure, P. J. (01-01-2011). NWO-meervoud evaluation committee [Print]. NWO-meervoud evaluation committee.

    Journal editor

    • Verschure, P. J. (editor) (2015). Frontiers in Bioengineering and Biotechnology (Journal).
    • Verschure, P. J. (editor) (2015). The Journal of Histochemistry and Cytochemistry (Journal).
    • Verschure, P. J. (editor) (2013). Frontiers in Bioengineering and Biotechnology (Journal).
    • Verschure, P. J. (editor) (2013-2014). The Journal of Histochemistry and Cytochemistry (Journal).

    Talk / presentation

    • Verschure, P. J. (speaker) (8-12-2015). Epigenetics makes us tick: Functional performance of epigenetic regulation and its impact on biomedical applications, seminar at The Department of Cell Biology and Histology, AMC, Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (1-12-2015). Wetenschapper (m/v): meer genderdiversiteit op de universiteit, Spui25: In samenwerking met honoursprogramma (S)hevolution (UvA & VU), Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (22-10-2015). Epigenetics makes us tick: Functional performance, time-delay, memory, cell-cell variability and robustness., The 13th Dutch Chromatin meeting, Radboud University Nijmegen, the Netherlands. http://www.rimls.nl/symposia/dutch-chromatin-meeting-2015/general-information/
    • Verschure, P. J. (speaker) (22-6-2015). Functional performance of epigenetic gene regulation in mammalian engineered cells: Time-delay, memory, cell-cell variability and robustness, Enabling Technologies for Eukaryotic Synthetic Biology- Session 2: Modeling and computer-aided design, EMBO EMBL Heidelberg, Germany. http://www.embo-embl-symposia.org/symposia/2015/EES15-04/index.html
    • Verschure, P. J. (speaker) (16-4-2015). Epigenetics makes us tick: Functional performance, time-delay, memory, cell-cell variability and robustness, Annual Meeting: Celebrating AIMMS, celebrating Science, VU University, Amsterdam, the Netherlands. http://aimms.vu.nl/en/news-events/events/2015/2015-04-16-annual-meeting.aspx?bron=banner
    • Verschure, P. J. (speaker) (29-1-2015). Epigenetic clocks as perspective for individualized medicine, the BioSB research school: O2 for Personalized Medicine and Nutrition: from inspiration to aspiration, VU University Amsterdam, the Netherlands. http://www.icsb-nl.nl/
    • Verschure, P. J. (invited speaker) (16-12-2014). Epigenetics makes us tick: Functional performance, time-delay, memmory, cell-cell variability and robustness, Netherlands Platform for Systems Biology (SB@NL), University of Maastricht, Maastricht, the Netherlands.
    • Verschure, P. J. (invited speaker) (16-1-2014). Epigenetic state switching in higher eukaryotes: Engineered mammalian cell systems and stochastic modeling, Department of Cancer and Surgery; Institute of Reproductive and Developmental Biology; host Prof Bob Brown, Imperial College, Epigenetics Unit, London, UK.
    • Verschure, P. J. (invited speaker) (19-11-2013). Epigenetic state switching: Engineered mammalian cell systems and stochasticity, M.V.Lomonosov Moscow State University, A.N.Belozersky Institute of Physico-Chemical Biology, Guest of Prof. Igor Kireev (head of the Electron Microscopy Dept), Moscow, Russia.
    • Verschure, P. J. (invited speaker) (19-9-2013). The dynamics and stochastics of epigenetic state switching studied in engineered mammalian cell systems, Conference on Transposition and Genome Engineering 2013, Budapest, Hungary.
    • Verschure, P. J. (invited speaker) (4-9-2013). Dynamic and stochastic epigenetic state switching studied in epigenetic engineered mammalian cell systems, 19th International Chromosome Conference, Bologna, Italy.
    • Verschure, P. J. (invited speaker) (25-6-2013). Epigenetic state switching in higher eukaryotes: Engineered mammalian cell systems and stochastic modeling', Chemistry of Life - Engineering Biology (NBV Werkgroependag and the KNCV spring event), Radboud University Nijmegen, the Netherlands.
    • Verschure, P. J. (invited speaker) (1-5-2013). Epigenetic state switching in higher eukaryotes: Engineered mammalian cell systems and stochastic modeling, Paul Erlich Institute, hosted by Prof. Zoltan Ivics (Head of the division of Medical Biotechnology), Langen, Germany.
    • Verschure, P. J. (invited speaker) (4-9-2012). Genome Engineering: Research and Applications, FASEB Summer Research Conference, Barga, Lucca, Italy.
    • Verschure, P. J. (invited speaker) (10-7-2012). Design principles of epigenetic gene regulation in higher eukaryotes: Systems biology approaches using mammalian synthetic cell systems, GUIDE Graduate School for Drug Exploration, International Seminar Programme, University Medical Centre Groningen, Groningen, the Netherlands.
    • Verschure, P. J. (invited speaker) (2012). titel, Dept. of Biology, Technische Universitat Darmstädt seminar hosted by Prof. Cardoso, Darmstadt, Germany.
    • Verschure, P. J. (speaker) (25-10-2011). Design principles of epigenetic gene regulation in higher eukaryotes: Systems biology approaches, International Marie Curie network meeting, Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (30-8-2011). Design principles of epigenetic gene regulation in higher eukaryotes: Systems biology approaches using mammalian synthetic cell systems, 18th International chromosome Conference, Manchester, UK.
    • Verschure, P. J. (speaker) (25-4-2011). Design principles of epigenetic gene regulation in higher eukaryotes: Systems biology approaches, Werkgroependag Nederlandse Biotechnologische vereniging, Ede-Wageningen, the Netherlands.
    • Verschure, P. J. (speaker) (14-4-2011). Design principles of epigenetic gene regulation in higher eukaryotes: Systems biology approaches, 8th International Symposium on Networks in Bioinformatics, Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (14-4-2011). Wie ben ik, wat onderzoek ik, waarom is wetenschappelijk onderzoek zo interessant, Girlsday VHTO, Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (24-3-2011). Design principles of epigenetic gene regulation in higher eukaryotes: Systems biology approaches using mammalian synthetic cell systems, International Seminar Programme GUIDE Graduate School for drug Exploration, University Medical Centre Groningen, Groningen, the Netherlands.
    • Verschure, P. J. (speaker) (2-3-2011). Epigenetic gene regulation of the eukaryotic genome: Systems biology and synthetic cell systems, 4th joint FEBS and Systems X Advanced Lecture Course, Innsbruck, Austria.
    • Verschure, P. J. (invited speaker) (4-10-2010). Epigenetic gene regulation of the eukaryotic genome: Sytems Biology approaches using synthetic cell systems, Annual Dutch meeting on Molecular and Cellular Biophysics (FOM), Veldhoven, the Netherlands.
    • Verschure, P. J. (invited speaker) (3-6-2010). Epigenetic gene regulation of the eukaryotic genome: Sytems Biology approaches using synthetic cell systems, SBMC 2010 Conference on Systems Biology of Mammalian cells, Freiburg, Germany.
    • Verschure, P. J. (speaker) (12-10-2009). Epigenetic gene regulation of the eukaryotic genome, 7th Dutch Chromatin Meeting: Systems Biology approaches using synthetic systems, University Medical Center Utrecht, Utrecht, the Netherlands.
    • Verschure, P. J. (speaker) (2-10-2009). Epigenetic gene regulation of the eukaryotic genome: Systems Biology approaches using synthetic systems, 1st Symposium on Systems Genetics: Systems Genetics: from man to microbe, from genotype to phenotype, University of Groningen, Groningen, the Netherlands.
    • Verschure, P. J. (speaker) (1-7-2009). Chromosome organization and epigenetic gene regulation of the eukaryotic genome., German Cancer Research Center, Division of Molecular Genome Analysis, DKFZ-Heidelberg, Germany.
    • Verschure, P. J. (speaker) (26-9-2008). Dysregulation of gene expression in Huntington’s disease: epigenetic control systems, Huntington’s disease PBF workshop, Naarden, the Netherlands.
    • Verschure, P. J. (speaker) (24-4-2008). Epigenetic gene regulation in Huntington’s disease, NIH workshop, AMC, Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (10-9-2007). Chromosome organization and epignetic gene control systems., The 6th Dutch chromatin meeting., Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (27-8-2007). Chromosome organization and epignetic gene control systems., The 16th International Chromosome Conference, Amsterdam, the Netherlands.
    • Verschure, P. J. (speaker) (16-2-2007). Chromosome organization and epigenetic gene control systems., seminar: Institute of Molecular Medicine, Faculty of Medicine, Lisbon, Portugal.
    • Verschure, P. J. (speaker) (15-2-2007). Functional chromosome organization in the interphase cell nucleus: Epigenetic gene control., seminar, Lisbon, Portugal, Gulbenkian Institute.
    • Verschure, P. J. (speaker) (22-12-2006). Chromosome organization and epigenetic gene control systems., Symposium Towards gene-specific chromatin remodeling., Groningen, the Netherlands.
    • Verschure, P. J. (speaker) (2-10-2006). Functional chromosome organization in the interphase nucleus: Epigenetic gene control., Symposium "Hot topics in Eukaryotic Transcription", Jagiellonian University., Krakow, Poland.
    • Verschure, P. J. (speaker) (7-9-2006). Functional chromosome organization in the interphase nucleus: Epigenetic gene control., Feulgen Prize awarding, 48th Symposium of the Society for Histochemistry., Stresa, Italy.
    • Verschure, P. J. (speaker) (15-11-2005). Dysregulation of gene expression in Huntington's disease by epigenetic control systems., Seminar, Dept. of Cell Biology and Histology, Academic Medical Center, UvA., Amsterdam , The Netherlands.
    • Verschure, P. J. (speaker) (18-2-2005). Epigenetic gene control and nuclear positioning, Therapeutic gene modulation., Meeting Drug Exploration, University Groningen, Groningen, The Netherlands.
    • Verschure, P. J. (speaker) (22-9-2004). Chromosome organization and gene regulation of the eukaryotic genomen., The 46th Symp. of the Society for Histochemistry, Prague, Czech.
    • Verschure, P. J. (speaker) (5-9-2004). Large-scale chromatin organization and gene gene expression., The 15th Int. Chromosome Conference., London, UK.

    Others

    • Verschure, P. J. (organiser) (6-3-2015). kick off meeting, UvA, UB, Amsterdam. EU H2020 MSCA-ITN EpiPredict (organising a conference, workshop, ...).
    • Verschure, P. J. (other) (2014). Ambassador, Faculty of Science, University of Amsterdam (other).
    • Verschure, P. J. (other) (2014). Executive board member, Dutch Huntington Disease Network Symposium, 23-05-2014 (other).
    • Verschure, P. J. (other) (2014). Member of committee, NWO-ALW ViDi (other).
    • Verschure, P. J. (other) (2014). Advisory board member, Rathenau Institute (EU SYNERNERGENE project) (other).
    • Verschure, P. J. (other) (2013 - 2014). member of the committee, NWO-ALW 'Investeringen Middelgroot (other).
    • Verschure, P. J. (other) (2013 - 2014). Chief of the executive board, Women in the Faculty (WiF) network (other).
    • Verschure, P. J. (other) (2012). organizing commiittee member, iGEM EU Regional Meeting (other).
    • Verschure, P. J. (other) (2012). Judge, iGEM competition 2012 (other).
    • Verschure, P. J. (other) (2012). organizing committee member, WiF Annual Meeting 2012 (other).
    • Verschure, P. J. (other) (2012). member, NWO-Meervoud Evaluation Committee (other).
    • Verschure, P. J. (other) (2012). organizing committee member, NISB annual meeting 2012 (other).
    • Verschure, P. J. (other) (2012). member, NWO-STW Evaluation Committee (other).
    • Fransz, P. F. (other), Stam, M. E. (other) & Verschure, P. J. (other) (2012). organizing committee, 10th Dutch Chromatin Meeting 2012 (other).
    • Verschure, P. J. (other) (2011). Executive Board member Women in the Faculty (WiF), UvA FNWI (other).
    • Verschure, P. J. (participant) (9-12-2010). Organization of Mini-symposium (SILS-NISB), Amsterdam, the Netherlands. Mammalian Synthetic Biology from tools to therapies (participating in a conference, workshop, ...).
    • Verschure, P. J. (other) (2010). Executive Board member, Women in the Faculty (WiF) (other).

    2021

    • Beckman, W. F. (2021). The role of epigenetics in transcriptional stochasticity and the implications for breast cancer drug resistance. [Thesis, fully internal, Universiteit van Amsterdam]. [details]

    2017

    2016

    2014

    • Schwabe, A. (2014). Non-genetic cell-to-cell variability: theory and experiments. [Thesis, internally prepared, Vrije Universiteit Amsterdam]. Amsterdam Institute for Molecules, Medicines and Systems.

    2013

    • de Groote, M. L. (2013). Potentials and pitfalls of epigenetic editing in gene-specific re-expression of epigenetically silenced genes. [Thesis, fully external, Rijksuniversiteit Groningen]. University Library Groningen.

    2009

    2020

    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 2 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673815.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 14 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673806.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 1 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673812.v1
    • Soleimani Dodaran, M., Borgoni, S., Sofyall, E., Verschure, P. J., Wiemann, S., Moerland, P. D. & Van Kampen, A. H. C. (2020). Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Springer Nature. https://doi.org/10.6084/m9.figshare.c.5067306.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 10 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673794.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 3 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673818.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. D. (2020). Additional file 13 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673803.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 4 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673821.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 8 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673833.v1
    • Soleimani Dodaran, M., Sofyall, E., Verschure, P. J., Van Kampen, A. H. C., Borgoni, S., Wiemann, S. & Moerland, P. (2020). Additional file 7 of Candidate methylation sites associated with endocrine therapy resistance in ER+/HER2- breast cancer. Figshare. https://doi.org/10.6084/m9.figshare.12673830.v1

    2017

    • van Hagen, M., de Leeuw, W. C., van Roon-Mom, W. M. C., Verschure, P. J., Piebes, D., Vuist, I. & Moerland, P. D. (2017). Additional file 5: of The dynamics of early-state transcriptional changes and aggregate formation in a Huntington’s disease cell model. Figshare. https://doi.org/10.6084/m9.figshare.c.3778547_d5.v1
    • van Hagen, M., de Leeuw, W. C., van Roon-Mom, W. M. C., Verschure, P. J., Piebes, D., Vuist, I. & Moerland, P. D. (2017). Additional file 2: of The dynamics of early-state transcriptional changes and aggregate formation in a Huntington's disease cell model. Figshare. https://doi.org/10.6084/m9.figshare.c.3778547_d2.v1
    • van Hagen, M., de Leeuw, W. C., van Roon-Mom, W. M. C., Verschure, P. J., Piebes, D., Vuist, I. & Moerland, P. D. (2017). Additional file 6: of The dynamics of early-state transcriptional changes and aggregate formation in a Huntington’s disease cell model. Figshare. https://doi.org/10.6084/m9.figshare.c.3778547_d6.v1
    • van Hagen, M., de Leeuw, W. C., van Roon-Mom, W. M. C., Verschure, P. J., Piebes, D., Vuist, I. & Moerland, P. (2017). Additional file 4: of The dynamics of early-state transcriptional changes and aggregate formation in a Huntington’s disease cell model. Figshare. https://doi.org/10.6084/m9.figshare.c.3778547_d4.v1
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