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Harkes, R., Kukk, O., Mukherjee, S., Klarenbeek, J., van den Broek, B., & Jalink, K. (2021). Dynamic FRET-FLIM based screening of signal transduction pathways. Scientific Reports, 11, Article 20711. https://doi.org/10.1038/s41598-021-00098-9[details]
Bernhagen, D., Jungbluth, V., Quilis, N. G., Dostalek, J., White, P. B., Jalink, K., & Timmerman, P. (2019). Bicyclic RGD Peptides with Exquisite Selectivity for the Integrin αvβ3 Receptor Using a “Random Design” Approach. ACS Combinatorial Science, 21(3), 198-206. https://doi.org/10.1021/acscombsci.8b00144[details]
Bernhagen, D., Jungbluth, V., Quilis, N. G., Dostalek, J., White, P. B., Jalink, K., & Timmerman, P. (2019). High-Affinity α5β1-Integrin-Selective Bicyclic RGD Peptides Identified via Screening of Designed Random Libraries. ACS Combinatorial Science, 21(8), 598-607. https://doi.org/10.1021/acscombsci.9b00081[details]
2016
Raspe, M., Kedziora, K. M., van den Broek, B., Zhao, Q., de Jong, S., Herz, J., Mastop, M., Goedhart, J., Gadella, T. W. J., Young, I. T., & Jalink, K. (2016). siFLIM: single-image frequency-domain FLIM provides fast and photon-efficient lifetime data. Nature Methods, 13(6), 501-504. https://doi.org/10.1038/NMETH.3836[details]
2015
Klarenbeek, J., Goedhart, J., van Batenburg, A., Groenewald, D., & Jalink, K. (2015). Fourth-generation epac-based FRET sensors for cAMP feature exceptional brightness, photostability and dynamic range: characterization of dedicated sensors for FLIM, for ratiometry and with high affinity. PLoS ONE, 10(4), Article e0122513. https://doi.org/10.1371/journal.pone.0122513[details]
Nahidiazar, L., Kreft, M., van den Broek, B., Secades, P., Manders, E. M. M., Sonnenberg, A., & Jalink, K. (2015). The molecular architecture of hemidesmosomes, as revealed with super-resolution microscopy. Journal of Cell Science, 128(20), 3714-3719. https://doi.org/10.1242/jcs.171892[details]
Nieuwenhuizen, R. P. J., Nahidiazar, L., Manders, E. M. M., Jalink, K., Stallinga, S., & Rieger, B. (2015). Co-Orientation: Quantifying Simultaneous Co-Localization and Orientational Alignment of Filaments in Light Microscopy. PLoS ONE, 10(7), Article e0131756. https://doi.org/10.1371/journal.pone.0131756[details]
Goedhart, J., Hink, M. A., & Jalink, K. (2014). An introduction to fluorescence imaging techniques geared towards biosensor applications. In J. Zhang, Q. Ni, & R. H. Newman (Eds.), Fluorescent protein-based biosensors: methods and protocols (pp. 17-28). (Methods in Molecular Biology; Vol. 1071). Humana Press. https://doi.org/10.1007/978-1-62703-622-1_2[details]
Hoogendoorn, E., Crosby, K. C., Leyton-Puig, D., Breedijk, R. M. P., Jalink, K., Gadella, T. W. J., & Postma, M. (2014). The fidelity of stochastic single-molecule super-resolution reconstructions critically depends upon robust background estimation. Scientific Reports, 4, Article 3854. https://doi.org/10.1038/srep03854[details]
Klarenbeek, J. B., Goedhart, J., Hink, M. A., Gadella, T. W. J., & Jalink, K. (2011). A mTurquoise-based cAMP sensor for both FLIM and ratiometric read-out has improved dynamic range. PLoS ONE, 6(4), Article e19170. https://doi.org/10.1371/journal.pone.0019170[details]
Goedhart, J., van Weeren, L., Hink, M. A., Vischer, N. O. E., Jalink, K., & Gadella (jr.), T. W. J. (2010). Bright cyan fluorescent protein variants identified by fluorescence lifetime screening. Nature Methods, 7(2), 137-139. https://doi.org/10.1038/NMETH.1415[details]
2008
Oomen, L. C. J. M., Sacher, R., Brocks, H. H. J., Zwier, J. M., Brakenhoff, G. J., & Jalink, K. (2008). Immersion oil for high-resolution live-cell imaging at 37°C: Optical and physical characteristics. Journal of Microscopy, 232(2), 353-361. https://doi.org/10.1111/j.1365-2818.2008.02106.x[details]
Zwier, J. M., Oomen, L., Brocks, L., Jalink, K., & Brakenhoff, G. J. (2008). Quantitative image correction and calibration for confocal fluorescence microscopy using thin reference layers and SIPchart-based calibration procedures. Journal of Microscopy, 231(1), 59-69. https://doi.org/10.1111/j.1365-2818.2008.02017.x[details]
2001
van der Wal, J., Habets, R. L. P., Varnai, P., Balla, T., & Jalink, K. (2001). Monitoring agonist-induced phosppholipase C activation in live cells by fluorescence resonance energy transfer. The Journal of Biological Chemistry, 276(18), 15337-15344. https://doi.org/10.1074/jbc.M007194200[details]
Talk / presentation
Brakenhoff, G. J. (speaker), Oomen, L. C. J. M. (speaker), Brocks, L. (speaker), Jalink, K. (speaker) & Zwier, J. M. (speaker) (15-4-2008). Quantitative image calibration for confocal fluorescence microscopy using thin reference layers and SIPchart based calibration procedures., Focus on Microscopy 2008, Awaji Island, Japan.
2017
Leyton Puig, D. M. (2017). Shedding light on endocytosis with optimized super-resolution microscopy. [Thesis, externally prepared, Universiteit van Amsterdam]. [details]
Nahidiazar, L. (2017). Unraveling Intermediate Filaments: The super resolution solution. [Thesis, externally prepared, Universiteit van Amsterdam]. [details]
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